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Journal: bioRxiv
Article Title: Physiological perfusion of human vasculature reveals a YAP/TAZ-Apelin switch linking intraluminal flow to endothelial state transitions and vessel remodeling
doi: 10.64898/2026.03.21.713033
Figure Lengend Snippet: (A) T1 endothelial cells on Day 4 plotted for APLN and APLNR expressions. (B) Rank plot of all analyzed genes and their correlation coefficient with APLN (left). Correlation of APLN expression with gene set scoring for YAP/TAZ targets (center). Overlay of scores onto the scatter plot of APLN and APLNR expressions (right). Expression values are from T1 endothelial cells on Day 4. (C) qPCR expression data of APLN and APLNR from monolayer endothelial cells treated with IAG933 (2 µM; 24 hrs; 3 independent experiments; 2-tailed unpaired student’s t-test). (D, E) Mapping tip cell and stalk-like clusters from the human tumor angiogenesis atlas of Goveia et al . onto T1 endothelial cells on Day 4, with (E) additionally showing RNA velocity streamlines. (F) Gene set scoring of T1 endothelial cells on Day 4 for Apelin up-regulated genes (Park et al ., ). (G) Negative correlation between gene set scores for YAP/TAZ targets and Apelin up-regulated genes. (H) Box plot summaries of (G). (A, B, G) Spearman’s correlation coefficient. (A, B, D-F) Axes show log-normalized expression values of APLN and APLNR denoised using Markov Affinity-based Graph Imputation of Cells. (I) Skeleton visualizations of vascular beds grown using low or high flow on Day 4. (J) Quantification of (I) (11 devices per condition across 6 independent experiments). Data is a subset of (L) and (N). (K) Skeleton visualizations of low/high flow vascular beds on Day 4 treated with IAG933 (2 µM). (L) Quantification of (K) (6 devices per condition across 3 independent experiments). (M) Skeleton visualizations of low/high flow vascular beds on Day 4 treated with ML221 (10 µM). (N) Quantification of (M) (5-6 devices per condition across 3 independent experiments). (J, L, N) 2-tailed unpaired Welch’s t-test. (C, J, L, N) * p < 0.05; ** p < 0.01; *** p < 0.001. Error bars show SEM.
Article Snippet: IAG933 (Piramal Pharma Solutions, kindly provided by Methvin Isaac, Ontario Institute for Cancer Research) was used at 2 μM,
Techniques: Expressing